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| Gomphonema angustum Kützing 1844 |
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| Gomphonema capitatum var. majus Kützing 1844 |
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| Gomphonema constrictum Ehrenberg ex Kützing 1844 |
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| Gomphonema contractum Kützing 1844 |
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| Gomphonema curvatum var. aquaticum Kützing 1844 |
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| Gomphonema curvatum var. marinum Kützing 1844 |
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| Gomphonema curvatum var. salinum Kützing 1844 |
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| Gomphonema dichotomum var. sessile Kützing 1844 |
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| Gomphonema digitatum Kützing 1844 |
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| Gomphonema exiguum Kützing 1844 |
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| Gomphonema flabellum Chauvin fide Kutzing 1844 |
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| Gomphonema intricatum Kützing 1844 |
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| Gomphonema italicum Kützing 1844 |
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| Gomphonema lagenula Kützing 1844 |
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| Gomphonema lanceolatum Kützing 1844 |
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| Gomphonema micropus Kützing 1844 |
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| Gomphonema minutissimum (minutissima) sensu Kutzing 1844 |
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| Gomphonema olivaceum (Hornemann) Kützing 1844 |
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| Gomphonema telographicum Kützing 1844 |
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| Gomphonema tenellum Kützing 1844 |
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