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| Cymbella neocaledonica Manguin ex Kociolek & Reviers 1996 |
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| Cymbella subturgida var. neocaledonica Manguin ex Kociolek & Reviers 1996 |
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| Cymbella tenuissima var. semiradiata Manguin ex Kociolek & Reviers 1996 |
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| Diatomella parva Manguin ex Kociolek & Reviers 1996 |
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| Epithemia argus var. lunaeformis Manguin ex Kociolek & Reviers 1996 |
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| Eunotia fallax var. bacillum Manguin ex Kociolek & Reviers 1996 |
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| Eunotia fallax var. vermicularis Manguin ex Kociolek & Reviers 1996 |
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| Eunotia monodon var. neocaledonica Manguin ex Kociolek & Reviers 1996 |
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| Frustulia neocaledonica Manguin ex Kociolek & Reviers 1996 |
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| Gomphonema bourrellyi Manguin ex Kociolek & Reviers 1996 |
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| Gomphonema neocaledonica Manguin ex Kociolek & Reviers 1996 |
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| Mastogloia malayensis var. robusta Manguin ex Kociolek & Reviers 1996 |
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| Melosira guillauminii Manguin ex Kociolek & Reviers 1996 |
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| Navicula corticela Manguin ex Kociolek & Reviers 1996 |
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| Navicula eichhorniaephila Manguin ex Kociolek & Reviers 1996 |
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| Navicula koniamboensis Manguin ex Kociolek & Reviers 1996 |
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| Navicula neocaledonica Manguin ex Kociolek & Reviers 1996 |
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| Navicula perlucida f. angustata Manguin ex Kociolek & Reviers 1996 |
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| Navicula saxicola Manguin ex Kociolek & Reviers 1996 |
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| Navicula verecundaeformis Manguin ex Kociolek & Reviers 1996 |
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